Ngs ValidateNgsFiles.pdf
From Array Suite Wiki
Validate SAM/BAM Files
This module will validate BAM/SAM files by indicating the "count" of reads that fall into a particular "mismatch #" grouping when compared to the selected Genome.
General
Input
The first step is to add the BAM/SAM files by selecting either "Add", "Add Folder" or "Add List".
Options
- Source File Format - Select the appropriate source file format (options include BAM and SAM formats).
- The Genome model used for mapping must be selected.
- Output name - The user can choose to name the output file.
