David.pdf

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DAVID

Overview

The DAVID command will allow a user to upload a list to DAVID (Database for Annotation, Visualization, and Integrated Discovery) for further gene annotation. For more information on DAVID, go to http://david.abcc.ncifcrf.gov/.

To run this module, select MicroArray | Annotation | DAVID.

David menu.png

Input Data Requirements

This module works on -Omic data types.


General Options

David0.png

Input/Output

  • Project & Data: The window includes a dropdown box to select the Project and Data object to be filtered.
  • Rows: Specify which rows will be uploaded to DAVID.

Warning.png WARNING: For DAVID Annotation, Array Studio only allows fewer than 1000 rows, so it would be good idea to filter the rows with a list using Customized rows


Options

  • ID column: Specify which column Array Studio will use to represent variable list (e.g. probeset IDs or gene symbols).
  • ID Type: David require users to specify the ID type for the uploaded ID list.
  • Analysis type: The user can specify which annotation analysis DAVID performs once Array Studio uploads the list. Available options include Annotation Summary, Gene Report, and Functional Classification.


Output Results

After clicking Submit, Array Studio will open a new webpage for the user to check the analysis result on the DAVID website.

David result.png


OmicScript

David

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